rs37598584 SNP Detail

Summary

• ID
  rs37598584
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:64439241 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATATTAAA CTGACCTTCA
  TTACATTTCT ATGTTTTTGT TATTTTCTGT AAGAGTAATA TTAAGTGGCT TAGTTAGCTA
  TCTTGATGTT TAGATATGGA CATGCTCTCT AGTGCTCTAG TTGCCCATAA GCACTTTCTT
  ATGACAGATT TATCATAGAA AAAAATGAAA AGTATATATT AGAAGCTTGA TTCAAAGTCT
  R
  TGTATTCTTG AATATAAAGC CACACTTTAT ATTCAAGAGT ATTTCTAACA TGATAGTGAA
  CTTAATCTAC TAAAAGTGTG GTTGTTTCTG TCATTTTTGT TGACTCTGGG GTTTGGGACA
  TTGTTTATTT ATTTATGTTT TGTTTTTGAG ACAAGATCTC ACTATGTGGA CCAGGCTGGC
  TTCAGACTCA GAGATGCACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51323173	NES13758885	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	G	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37598584					SNP	A	A	A	A	A	A	A	A	G	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51323173	NES13758885	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:64439241 () rs orientation: forward

Symbol	Name	Function Class
Grid2	glutamate receptor, ionotropic, delta 2	Intron
Rr379493	regulatory region 379493	1984 bp upstream