rs37604075 SNP Detail

Summary

• ID
  rs37604075
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:11174668 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTCTCTGC ACCGTATTGG
  TTTTGGATTT GATATGAGGC AGTAGTTCAA CGTTTGTGAA GAGAAACATA AAGATGCATA
  GATAGCTATG AAAAGATAAA GAATACTCTA CTACTGGAGA GCAAATGGGG AGACAGAAAG
  GAAAACCTGT TTTCTCTAGG GAGCACAGGC CACCTGCCGA GCACCGAAGA CTTCCTGAGG
  R
  CTTAAAGACC CTTGGACAGT AGATGCTCCT TTAACCAGAG CATGCTGTGA GCTTTCATTT
  ATTCCTGGAA GACTTAAAAT TCTGGCTTAC ATTGCAAATA TTTCGTGGAT GATAATCCTT
  TTATGAAGGA TAATCTTTTT ATAATATATA TTCATATAGT ATTATATTAT TTATATTTCA
  TTATATGTTA CATAGTATAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss50597152	NES13640022	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs37604075					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50597152	NES13640022	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:11174668 () rs orientation: forward

Symbol	Name	Function Class
4930526L06Rik	RIKEN cDNA 4930526L06 gene	within coordinates
Ms4a13	membrane-spanning 4-domains, subfamily A, member 13	567 bp upstream
Tssr158299	transcription start site region 158299	612 bp upstream
Tssr158300	transcription start site region 158300	562 bp upstream