rs37606618 SNP Detail

Summary

• ID
  rs37606618
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:94006649 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATATCAAC TAATACACTA
  TGGAATGCTG TTAGTATTCA GTATTTTAAC AGCAACAACA TTAAATTCAA TTCCCTTATT
  TTACCTATAA TCTTCCATTC TTGGGTTGTC CTAACTTTGC TATGTAGGTG GGCTAAGCCC
  ACCCTAAGCA CAGCTTCCTG ACTTTCTAGG ATGCATCCTA TACTCTTTAA GCACTATTCT
  Y
  CTCACCAGTG ACTACACACT GAGAGTTTAT CATGAACAAT TTCCCTATGG CTTTTTAAAT
  GTGCTTTACT TCCTCCAATG AGACTTTATC TCTCAAAGAT TCCACAGCCT CCCCAGACAA
  CATCGCCAAC TGGCAGCCAA GTGTTCAAAC ATCTAAGCAA CTGGGAAGAT TCTCATTGAA
  ACCACCACAC TGTATTCATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51369961	NES13733961	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37606618					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51369961	NES13733961	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:94006649 () rs orientation: forward

Symbol	Name	Function Class
Magi1	membrane associated guanylate kinase, WW and PDZ domain containing 1	within coordinates
Tssr62166	transcription start site region 62166	829 bp upstream