rs37607942 SNP Detail

Summary

• ID
  rs37607942
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:68314675 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACACACATA AAAACAGAAA
  TAGAAAATAA AAACAGATCC TTAATTTTTT TTTTTTTCTG AATTCACATG GCAACTCTTC
  TCTTACAAGC TGCCAGCCCT CAAATTCATC ATTTACATCT GGATGCTTCA GCTTCCTGTG
  TGGCATGAAG ATAGTAAAAG AACCTATCTC TTAGGATTGC AAATCAAGTG ATATATTTAC
  R
  TGTTTATACA CACACCCACC ACCTAGTACA ATGACTAGGT TGCTAGTAAT TGGTAAACAC
  AGTAGCTATT TTCCTTGTTT AGATATTTCA TCAAGGGAAA ATATATACAT TAATACAAAT
  ATATCTTTCC TGTTAATATC ATGATATTAT GCATTTATTT ATGATATTTA AGAATATATT
  TATATATGTT CATTATTTCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50975054	NES13920837	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37607942					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50975054	NES13920837	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:68314675 () rs orientation: forward

Symbol	Name	Function Class
Gm10723	predicted gene 10723	441 bp upstream
Iqschfp	Iqcj and Schip1 fusion protein	within coordinates
Schip1	schwannomin interacting protein 1	within coordinates