rs37610874 SNP Detail

Summary

• ID
  rs37610874
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:125144560 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTTTAATT CTTTCCCCAT
  CTCAAAGGTA TTAAATTCTT ACTAGCCTTA AGAAAGGGAT TCCTGGAAAT CCCTGGATAA
  TTTTTGTTAT TGTTGTTATT CTTTTATTAC TATGCTCATT TTTCAAAGGT CAAATAAGAA
  AGAGATCCAT ACTATTTCTA ATCTCAGTAA TAGGAATCAG AAATAAACTA GAGTCGACTG
  M
  AAGTGTCTGG GAGGAACAGT ACCATTCGAG GAGGATTAAA GTATCACAAC GGAGTGAGTC
  AGCCCGGCCA GAGACATGGG ACACAGGTTC TTCCTTGTCA CCAGGATGAG CCTCTTGGGT
  TTACTGACTC CTCTAGCCGC CCGACAGCGG ACTCCCCTGT GACCCATTGT TCCGTTCAGA
  GTCTTGGGCA CCTTTTCCAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50936251	NES14269321	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	A	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37610874					SNP	C	C	C	C	C	C	C	C	C	A	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50936251	NES14269321	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:125144560 () rs orientation: forward

Symbol	Name	Function Class
Gm45604	predicted gene 45604	178 bp upstream
Slc16a7	solute carrier family 16 (monocarboxylic acid transporters), member 7	within coordinates
Tssr96086	transcription start site region 96086	277 bp upstream
Tssr96087	transcription start site region 96087	305 bp upstream
Tssr99673	transcription start site region 99673	101 bp downstream
Tssr99674	transcription start site region 99674	114 bp downstream
Tssr99675	transcription start site region 99675	118 bp downstream
Tssr99676	transcription start site region 99676	152 bp downstream