rs37611842 SNP Detail

Summary

• ID
  rs37611842
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:45513137 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTATCTTAAG GGATGCAGGG
  TGGGGGTGGC ACATACAAGG AAGAGGACTC AGAATCAAGA GAGAGAAAAA GTGTACCCCC
  GGAACATGGA GTGACTAGCA TAGCTGGCTG TAGAGGGAGA GAAGATGGAC TGATGGGTCT
  CTTGCCAAGG TTAGGAGATT ACCAAACCCT TTCACTGAGA AAATGGGACC CAAGCAAGAC
  Y
  TTAATGCAAA GAATGAGTTG GTTTTGTTGT TAAGTCAAGA TGCTGAGTGT CACCAATGAT
  CACGGCAGTG AGAGACTCAG TCCCTGGCAC CAGGGAGCCA AGTCCAGTAA AGAGACACAC
  CTTTATCTGT TGACCACATA GTTCATCATA CAGATACTCT TGTGACATGA ATGGGGTGGT
  CACTAGATTC TCAGGACTTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52012063	NES15026848	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37611842					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52012063	NES15026848	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45513137 () rs orientation: forward

Symbol	Name	Function Class
Dscaml1	DS cell adhesion molecule like 1	within coordinates
Rr195123	regulatory region 195123	137 bp distal
Rr200399	regulatory region 200399	537 bp distal