rs37612396 SNP Detail

Summary

• ID
  rs37612396
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:126167049 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACTGAGTGAG CACCAACGGT CTCTTCTGCA CTCTTTCTGC
  AGCTGACTCC TGCCCCCAAG GTTTCCTGGA GGGAGGGAAG GATGACCACC TGAAGACTTG
  M
  TAAGAAGATG GGAGGATTAA TTACCTCATT AATGAAGATT GTGCCTAAGT ACTACAGCAA
  GCTCTCCCTC AGGTAGCTGC AGACCCACAG GACTAAAGCT                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	KK/HlJ	NZW/LacJ
ss51820875	NES14712607	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	KK/HlJ	NZW/LacJ
rs37612396					SNP	A	A	A	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51820875	NES14712607	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:126167049 () rs orientation: forward

Symbol	Name	Function Class
D5Mit214	DNA segment, Chr 5, Massachusetts Institute of Technology 214	191 bp proximal
Rr116253	regulatory region 116253	849 bp distal
Rr116254	regulatory region 116254	1952 bp proximal