rs37613409 SNP Detail

Summary

• ID
  rs37613409
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101424307 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGGATCAA GGCTCTCCTT
  GCCAGGGGGA AGGAGACATT CTTGTGCAAG GCCTTCCCGA CCCCCACGTT TCCCTCAGCA
  CGCCCAGATA AGCATTCTCC TTTGCCCCCC AGCTCCTAGC CACTCCCCAC TTGTGAAAGA
  GGAGCGTGAC TCACATCTAT GGGGAAGGCA GTTAGGTGAG CCTAACTCAA ATGCCAGGCA
  R
  ATGCTAATAG CAGGCTTTTC TATGAATAGC AGCCCCGTTG TTCCCTGGAG GCTGAGCCAG
  TGCCTTCTCA TCCAGAGTAC ATTTGCGCTT TTCCAATTTA CGAGCTGAAC CCTGGGCTGC
  CTACCTTTGG TCCCCTCAAG GCCAGCTCGG TGTTCTTTGT TCCCTAAAGT CTCCCCAGAG
  TGAAACATTA ACAGGCGGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51584375	NES14670581	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37613409					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51584375	NES14670581	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101424307 () rs orientation: forward

Symbol	Name	Function Class
Gm33162	predicted gene, 33162	within coordinates
Rr582066	regulatory region 582066	within coordinates
Rr582067	regulatory region 582067	84 bp proximal
Rr582068	regulatory region 582068	1577 bp proximal