rs37615566 SNP Detail

Summary

• ID
  rs37615566
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:7501669 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTGCCCGCA TGAAGTACAC
  ATAAAACCAA GACCTTGTTT GTTTTCCATA GGGAAAGCAA TCACGGGATA AAATTACATA
  CTTGCTCAAG TCTAGCTGAT GGTTCAGTCT GTCAGCCTCT TTGCCTCTCT GAATTTTAGG
  TTGGCATATT CTCTGTGTAG TGCCTACACT AAGCCACAAG CTGACTTGGC TGGCCTAGTG
  Y
  ACACATCCCT CATCCAAGCT GTGGCTCAAA GGCCTCAAAG CCTCCTGGTT TAGGAAGAGG
  AGGACAGAGG TAGGAAGAAT ATTTTCATTT AATAGTTAAT TAACTGATTT CCATTTGACA
  CGTCTTTATG GAGCCAGTAT ATGCTTATAG CAATTATTCT GAAACAGAGA GTAGGTGGGC
  CCCAAGCTTC TTACCTCTGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss50642765	NES14032052	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	C	T	T	C	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs37615566					SNP	T	T	T	T	T	C	T	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50642765	NES14032052	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:7501669 () rs orientation: forward

Symbol	Name	Function Class
Mmp10	matrix metallopeptidase 10	684 bp upstream
Rr382877	regulatory region 382877	904 bp downstream
Tssr83744	transcription start site region 83744	672 bp upstream