rs37618859 SNP Detail

Summary

• ID
  rs37618859
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:27860252 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGAGCAGT CGGGTGCTCT
  TACCCACTAA GCCATCTCAC CAGCCCCTGA CCCTATTCTT GTTCCAGTCC AACACCTTCC
  CTTCTGTCCC TGACTCCTTC TGTGCCTTCC CACCTCATCC CTGACCTCTG CCCTGCTCAG
  CCATTTTGGA TTTGTGAAGC AGACACCTAG AGGAAAGTCC ACAGAGAGAT ACAAGCATTC
  R
  AGACCTTGGG GTACTAGTAG GACACTCAAC TCACTGAACC TTAGTTCATG TCAATGGATT
  CCACCCTATG AAGATTATTA GGGGACGATT GTCCTGGTCA TGTACAGAAC TGTTTTATCG
  TCATGATCTC CTAGTCAGTG CCACACTGTC TAAGTATGTC TGTAGCATGT GCATTACATT
  AGGCGTGCTG TAAGGTGTAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51887355	NES14907132	PERLEGEN	MM_PANEL2	f	SNP	A	G	G	G	G	G	G	G	G	G	G	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37618859					SNP	A	G	G	G	G	G	G	G	G	G	G	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51887355	NES14907132	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:27860252 () rs orientation: forward

Symbol	Name	Function Class
Fcgbpl1	Fc fragment of IgG binding protein like 1	within coordinates
Rr170293	regulatory region 170293	1053 bp distal
Rr380562	regulatory region 380562	481 bp upstream
Tssr65436	transcription start site region 65436	1396 bp downstream
Tssr65437	transcription start site region 65437	1333 bp downstream
Tssr65438	transcription start site region 65438	335 bp upstream
Tssr65439	transcription start site region 65439	1896 bp upstream
Tssr65440	transcription start site region 65440	1952 bp upstream