rs37624837 SNP Detail

Summary

• ID
  rs37624837
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:58663311 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTTTCCATT GATTTTATTG
  AATAGAAACA CAAAGGAAGC AATCTAGCCT GACTGGAGCA CTGAAAAGTC TTTTAAAAAA
  TGTCAAACTC AAATGTGCTT CAGTAATTGC CTTGTGGGCC CTGATCCAAA TCCTTGCCTC
  GCCATCTCCA AATATGACCT CATGTGTCCT TCCTGGGTTT CTCTCTCAGC AGTGGGAGGA
  M
  ACACAGGATT CTAAGCCTAG TTGAACTAAT TTCTGTTTCT TCTTAATGGT GTGGGGGATG
  CTCTGAAGGG GGTAGGGAAC ACGTCTCCTT AGAAACCAAG GTCTGGAGGC ACCCTTGACC
  ATCTGGCATT TTGAATTACT TGGAAACATT TTAATGAAGC TTTCCTTCCA ACAGTCTGAT
  CTGGGATACT CACTTAACAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	MOLF/EiJ	PWD/PhJ
ss50904017	NES13492682	PERLEGEN	MM_PANEL2	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	MOLF/EiJ	PWD/PhJ
rs37624837					SNP	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50904017	NES13492682	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:58663311 () rs orientation: forward

Symbol	Name	Function Class
Cpgi11111	CpG island 11111	1088 bp proximal
Pnlip	pancreatic lipase	within coordinates
Rr361109	regulatory region 361109	within coordinates
Tssr5571	transcription start site region 5571	1752 bp downstream
Tssr157266	transcription start site region 157266	1794 bp downstream
Tssr157267	transcription start site region 157267	1775 bp downstream
Tssr157268	transcription start site region 157268	1721 bp downstream
Tssr157269	transcription start site region 157269	1128 bp downstream
Tssr157270	transcription start site region 157270	1054 bp downstream
Tssr157271	transcription start site region 157271	177 bp upstream
Tssr157272	transcription start site region 157272	188 bp upstream
Tssr157273	transcription start site region 157273	1319 bp upstream
Tssr157274	transcription start site region 157274	1351 bp upstream
Tssr157275	transcription start site region 157275	1371 bp upstream
Tssr157276	transcription start site region 157276	1394 bp upstream
Tssr157277	transcription start site region 157277	1635 bp upstream
Tssr159959	transcription start site region 159959	1742 bp upstream
Tssr159960	transcription start site region 159960	1694 bp upstream
Tssr159961	transcription start site region 159961	269 bp downstream