rs37628183 SNP Detail

Summary

• ID
  rs37628183
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:28392347 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGTG CCAGAGCCCT GGCCTAATCT
  R
  TGTCCTCAGG TGGATTCCTA AACTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss51886710	NES14910674	PERLEGEN	MM_PANEL2	f	SNP	A	A	G	G	G	G	G	G		G	A		G
ss148635397	ENSMUSSNP962525	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
ss322126001	CHEV_7_29477941	CHEVERUD	SCREENING_POP	f	SNP									A			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs37628183					SNP	A	A	G	G	G	G	G	G	A	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51886710	NES14910674	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:28392347 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18715	CpG island 18715	137 bp proximal
Fbxo27	F-box protein 27	within coordinates
Rr644337	regulatory region 644337	within coordinates
Rr644338	regulatory region 644338	607 bp proximal
Rr644339	regulatory region 644339	1108 bp proximal
Tssr65494	transcription start site region 65494	88 bp downstream
Tssr65495	transcription start site region 65495	52 bp downstream
Tssr65496	transcription start site region 65496	81 bp upstream
Tssr65497	transcription start site region 65497	90 bp upstream
Tssr65498	transcription start site region 65498	110 bp upstream
Tssr65499	transcription start site region 65499	1075 bp upstream