rs37628386 SNP Detail

Summary

• ID
  rs37628386
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:27799705 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTTAAAA AAAATGGAGG
  GAGAAGGAAA AAAGGGATTA AAAAATAAGG GTTAAGGCTG GAGAGATGGC TCAGTGGAGA
  GATGGCTCAG ATGGCACTGG CTGTTGGCTG TTCTTTCAGA GGACCTGTGT TCAGTTCCCA
  GCACCCACAT GGTGGCTGTG GAGAGACAGA GACAATGACA GACAGACAGA GTTTGTGTCT
  R
  TTCACTACCA AGGTTTGCAT GTGTTTCTGC CCTCACCCAC CTCAGTGGCT AGCTGCTTTC
  CTGCTGTCCC CGACTCACTC CTCAGAAATG ATAGCAGTTA GTATGTGTGA ACAGTCCACC
  TCCTTCCTGG CTGCTTTCAG ATAAGGGAAA CAGTGCTCAC AGGAGTCCTG CCTAGAGCTG
  ATCCCCAATG CTGAGAGAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51887575	NES14907988	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37628386					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51887575	NES14907988	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:27799705 () rs orientation: forward

Symbol	Name	Function Class
Fcgbp	Fc fragment of IgG binding protein	within coordinates
Gm10935	predicted gene 10935	within coordinates
Gm21925	predicted gene, 21925	within coordinates
Tssr65362	transcription start site region 65362	974 bp upstream
Tssr65363	transcription start site region 65363	1015 bp upstream