rs37630258 SNP Detail

Summary

• ID
  rs37630258
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:95722384 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGGAGGTTT GGTAGCTGAC
  CTTGGGAACA GAAAGATCCT GCAGTCCACA GACGGGCATT CTGCCTGGGC CTTGGGGAAC
  CCAGTGCATC CCCCAGAAAG CCAGCGGGGT GGCCTTGGGC AACTCAAGAA AGCAGATAGA
  AAAAGGGGAA CTTAGAGGGG ACACAGAGAC TGCTGTAGTC TGAAAGGGAA GAAAGTCTGG
  R
  CAGATCTGTG CGTCTTCTTT GTCCCTCACT GCCTGCTCAA AGGTAGGTTT TTCCCTAATG
  TACATACCCT AAATTGGCCA AGGATGGGGG CCATAGTCTC CCATTGCAGA GGACGGGGTC
  ATAGTTACCC ATTGACCAAG CAGGAAACTG AGACCCACTG AGATGCAGGC TAGCTCAAGC
  TTCCAGGTTT AGAGACCCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss51973973	NES14993124	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A		G	A	A	G		A
ss322809834	CHEV_8_97519656	CHEVERUD	SCREENING_POP	f	SNP											G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs37630258					SNP	A	A	A	A	A	A	A	A	A	A	G	G	A	A	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51973973	NES14993124	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95722384 () rs orientation: forward

Symbol	Name	Function Class
Adgrg1	adhesion G protein-coupled receptor G1	within coordinates
Tssr78944	transcription start site region 78944	1429 bp downstream
Tssr78945	transcription start site region 78945	1366 bp downstream
Tssr78946	transcription start site region 78946	1323 bp downstream
Tssr78947	transcription start site region 78947	1035 bp downstream
Tssr78948	transcription start site region 78948	967 bp downstream
Tssr78949	transcription start site region 78949	953 bp downstream
Tssr78950	transcription start site region 78950	904 bp downstream
Tssr78951	transcription start site region 78951	135 bp downstream
Tssr78952	transcription start site region 78952	62 bp downstream
Tssr78953	transcription start site region 78953	8 bp downstream
Tssr78954	transcription start site region 78954	within coordinates