rs37631080 SNP Detail

Summary

• ID
  rs37631080
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:4842469 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATGGAAGGC CCTGCATTCA
  ACTTCCTTGA TGCCCCTGCC GTTCCTGTCA CTGGTGCTGA TGTCCCTATG CCTTACGCAA
  AGGTCCTAGA AGACAACTCC GTACCTCAGG TCAAAGACAT CATATTTGCA GTAAGGAAGA
  CTTTGAACAT CTAATTCGGA CTTTGAATGT AAAGTCATTG AAATCTATTT AAAATCCTTG
  K
  TGGGACTTCA CCTGATGTGT ACTGCGAGAC TGCTAGTCAT AAAGTTAACG CTGAAGTGAC
  AGCAGGTGTC TGAACTGTAA GAAGTTTCAA TGTGCTTATG AGTGGAATGT TTTCCACTCC
  CTACCCTAGA TACTCTGCTT TCTTTGTCTG TTACTGTTTA AGTTAAATTT GCCCTCTTTC
  ACTAGAAGGG GCAAGATAAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss50908874	NES13484785	PERLEGEN	MM_PANEL2	f	SNP	G	G	T	T	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	C3H/HeJ	CAST/EiJ	DBA/2J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs37631080					SNP	G	G	T	T	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50908874	NES13484785	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:4842469 () rs orientation: forward

Symbol	Name	Function Class
Gm6123	predicted gene 6123	47 bp downstream
Mrpl15	mitochondrial ribosomal protein L15	963 bp downstream
Rr407423	regulatory region 407423	1916 bp distal
Tssr5799	transcription start site region 5799	1124 bp downstream