rs37635574 SNP Detail

Summary

• ID
  rs37635574
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:49315812 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTGACTCA TGTAGCAGGA
  CAAGAATATG AAACACAAGA AAAATTACTT TTGAAAAGAA ATGTTATAGC TACTTTGGCT
  TCTATCCAAC AAAGGTCCAT TTCTGACATG GGTGGTTTTG AGAACTATTA TTGTGCTTTG
  CAACAGTGAT GGTCAACTGA AGCCTTTGAC AAATAAATGC ATTATTTCCA ACATCAATAG
  Y
  CAGCATCTAA GTCTACATTT TTCCCTGTAA ATGGAACTAG ATTATGCATC ACTGACTTTT
  ATCTGCAATA GCCATGGATT GCTGGATGCT TAACTTACAA AGAGCAGGAG AATTCAACAT
  ATGAGTTCAA ATAAATAAAG GAGGAAATAG TAACAAATTG TTTTTAGTGA TGACCTTGAT
  ATGGGTTATT TTAGGACATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
ss51106698	NES13870523	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	KK/HlJ	MOLF/EiJ	NZW/LacJ	WSB/EiJ
rs37635574					SNP	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51106698	NES13870523	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:49315812 () rs orientation: forward

Symbol	Name	Function Class
Kcnip4	Kv channel interacting protein 4	within coordinates
Tssr50938	transcription start site region 50938	902 bp downstream