rs37637305 SNP Detail

Summary

• ID
  rs37637305
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:15228458 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATACAGTA AAAAGAACCT
  TTTATAGTTT GTATGTATTT TGGGTCTGGA GTTTCTAGTG TTTTATTTCA ATTTGTACTT
  TGAATGAAAG GTCATCCTTT TTCTTGCTTT CATTCTCTTT GCTGTTTCAC CCCAGCTAAC
  TGCCTGTGCA ACCTGTAAGA GAAATTTGTG GAATTAGGCT GGTAATATTA GCAAAATAAT
  W
  AGTGCCCTGA AGACAGCTTT TTTTCTCTTT AGGAAGAGTC ACTTTATTCA CACCCTGCAG
  GAAGCTCAAG GATGAGTCTT AAAGTCTTTG TAATCTCTAC TGTGCCAAAC AATACAAATG
  CAGATGAAGT AGGCTTCATC CCTGGATGGT TCAATATACA GAAATCCATA GAAGTAGATA
  TCTCATTAGA TGCTGACAGC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51990121	NES15005919	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	A	T	T	T	T	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37637305					SNP	T	T	T	T	T	T	A	T	T	T	T	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51990121	NES15005919	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:15228458 () rs orientation: forward

Symbol	Name	Function Class
Cep295	centrosomal protein 295	within coordinates
Gm22579	predicted gene, 22579	354 bp downstream
Gm22620	predicted gene, 22620	1841 bp downstream
Gm23455	predicted gene, 23455	574 bp downstream
Gm24357	predicted gene, 24357	1567 bp downstream
Rr208215	regulatory region 208215	658 bp distal
Taf1d	TATA-box binding protein associated factor, RNA polymerase I, D	171 bp downstream
Tssr83865	transcription start site region 83865	1626 bp downstream