rs37637619 SNP Detail

Summary

• ID
  rs37637619
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84423402 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACTGTGTAT CTGAGCAGTA GTCACCATAG GGGGAAACCG
  ATGCTCAAAG AGGCCATAGC TGTGCTCTCA GTGAAGGTAG GGTCGTCTTC TCATCGCCTT
  R
  AGAAACGCAT GTCAATGTCT GGGGTCATTC TTGTTGTCAT TACAACCAAA GTATACAGGG
  GACACCTATC CATGTCAACA TTCCGAGGTA CACAGGACA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J
ss51971797	NES14985508	PERLEGEN	MM_PANEL2	f	SNP		A	A	A	A	A	A	A	G	A		G	A	G
ss145360182	ENSMUSSNP83285	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A						A
ss322745519	CHEV_8_86220672	CHEVERUD	SCREENING_POP	f	SNP											A				G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J
rs37637619					SNP	A	A	A	A	A	A	A	A	G	A	A	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51971797	NES14985508	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84423402 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20652	CpG island 20652	1073 bp proximal
Cpgi20653	CpG island 20653	1453 bp proximal
Pkn1	protein kinase N1	within coordinates
Rr666288	regulatory region 666288	1001 bp distal
Rr666289	regulatory region 666289	491 bp proximal