rs37645027 SNP Detail

Summary

• ID
  rs37645027
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:84118068 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACCATCTTT AATTGTATCT
  GATGCCTTCT TCTGGTGTGT CTGAAAACAG TTACTCATAT AAATAAAATA AATAAACCTT
  AAAAAAAGAA AGAGCACTGG CTGTTTTTCC AGAGGACCCA GGTTCAATTC CCAGCAGCCA
  CATGGCAGGT CAGTAAGTGT CAGTAACTCC AGTTCCAGAG GAGCTGATGC CCTCACACCA
  S
  TGCATATTAA AATAAAAAAG ATGATTAATT TAATCAATGA AATGTATAAG AGAGCTTGTT
  GAGAGTGATG AACCAATGCT TCTTCAGGCC TTTTATTAGC CCAATTAGTT GTTTCTAATA
  ATAATTCTTT GATATAAAGT GATATGTTAT ATATATATAT ATATATATGT ATATGTACAC
  ACATATATAC ACACACATAT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52030586	NES15049332	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	C	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37645027					SNP	G	G	G	G	G	G	C	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52030586	NES15049332	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:84118068 () rs orientation: forward

Symbol	Name	Function Class
Tssr86376	transcription start site region 86376	1861 bp downstream