rs37648660 SNP Detail

Summary

• ID
  rs37648660
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:56582476 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATATTTAT TCATTGTATT
  TCAGATATAA AGATATATAA AGTCTTAGAA CAATACATTT TTTTAAAAAA ACTATGAAAT
  AAGCATAATG CTTTTATTTA GATTAAAGAT GTAATTCAAG TACAATGACC TGATTAAGTT
  TATTTTAATA CTTTATTTTT CTGTGTAATG TGTGAGCAAA AATTATCTTT GGAGAACAGC
  R
  TTTCCACACA GTCTCTAGCC AAGCTTGTTA ATGTTCTTGA GGGATAGGGA CTCTGAAATG
  AACGCCAAAA AGGATTCAGA TGTAAAACTG TACTTGGACT TGTTTGAATA ATTTTGCATT
  TCTTTACTGT TTTCTCTTTA TGAATTATGC AGAAGCTTCT CCTTAAGCCC ACACTTTAGT
  GTGTGATGAG TGATAAGACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51962347	NES14978634	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37648660					SNP	A	A	A	A	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51962347	NES14978634	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:56582476 () rs orientation: forward

Symbol	Name	Function Class
9330109K16Rik	RIKEN cDNA 9330109K16 gene	200 bp upstream
Glra3	glycine receptor, alpha 3 subunit	within coordinates