rs37651520 SNP Detail

Summary

• ID
  rs37651520
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:128046338 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCTCCCTAG TGTCTCTTTC
  CCTTTGTCAC ATAACTGGCA CAATGGTTAT GGCAAACTGC CTAGGTATCA GGTATCCAGA
  AGACAGATGG ACTCAGAGTG GAGATAGCTG CATCTGGGTT GGACTGACAT CTCTAGTGCT
  GAGGTACAAC TGAGGAAGCC AGAACCCAAG AATCTGAGGT GCATCAGAGA AAAGGCCAAG
  Y
  CTGTGGCTGC CACTCCTCCA GCCAGAGGTA GAGAGCATTT ACTCTAGAGA ATCTGGTGAG
  CCCCCAAAAC AAGTTACATG TGGATAAGGG ACGGGCCGAG AGGCAGGACC GCAGGACTGA
  ACAGTCTAAG GTGTGTGGGC ACAAGTAGAA GGACCCAAAG AACTGGCCTG AGGAGGCGAA
  TCCCCTGATG ACCTAGGAAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss50948649	NES14143296	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	T	C	C	C	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37651520					SNP	C	C	C	C	T	C	C	C	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50948649	NES14143296	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:128046338 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2387	CpG island 2387	1149 bp proximal
Gls2	glutaminase 2 (liver, mitochondrial)	465 bp downstream
Rr224447	regulatory region 224447	62 bp proximal
Rr402345	regulatory region 402345	1241 bp upstream
Spryd4	SPRY domain containing 4	within coordinates
Tssr99849	transcription start site region 99849	1297 bp downstream
Tssr99850	transcription start site region 99850	1319 bp downstream