rs37655034 SNP Detail

Summary

• ID
  rs37655034
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:12731574 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATCTCTTGTG TTCTGGATTA CGGCATCCTT CAGCTTTGCT
  TTCAGGACCC ATGCTGCCTG ACAGGACCTG GCATCCAGCT GGCTATTTGT GATTGAGGAG
  Y
  CCTCAGACCC AGTACACACC AAGGCCACCC GGTCAGGCCA TGCCAGTGCT TGCCGCTCTA
  AAGCATCCAC AAAGGTCTCT GGAGGATGTT TGTTAAGGCG                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51468902	NES13984159	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37655034					SNP	C	C	C	C	C	C	C	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51468902	NES13984159	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:12731574 () rs orientation: forward

Symbol	Name	Function Class
Rr642427	regulatory region 642427	493 bp proximal
Slc27a5	solute carrier family 27 (fatty acid transporter), member 5	within coordinates
Tssr2079	transcription start site region 2079	1429 bp upstream
Tssr64508	transcription start site region 64508	1474 bp upstream
Tssr70630	transcription start site region 70630	194 bp upstream
Tssr70631	transcription start site region 70631	20 bp downstream
Tssr70632	transcription start site region 70632	463 bp downstream
Tssr70633	transcription start site region 70633	493 bp downstream
Tssr70634	transcription start site region 70634	525 bp downstream