rs37666155 SNP Detail

Summary

• ID
  rs37666155
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:59997376 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGGGAAGGA CTTCGAAGCA
  GCCTCTCCAA GGTCAACCAC GTCACACCTC CGACCCTTAC TCTTGAGATG GTCAGCTTCA
  TTTCCAGCCA TGCTAATAAT AGCCAAGGGA GAATCTGACC ATAACATATC AAGGTCATTA
  CGGACGCTTG AGAAATCAAG CAGCCTGGTG ATGGGAGGTG GCACAACTTC TTGTCCTGCC
  K
  GAATGCTCAA CCACAAAGAG AAAGCATCAG CAGTCACAGC GAGGCAGGAG CTAACACGGG
  AGTACGAGCC ACAAAGAGCA CAGGACATAT TTGTTTGCTA TGTGGTACTT TGTTCACCGT
  AAATGCCTCT TGAGCTTCCA TCAGAATCTA AAGCATGTTT TCGTGTGTAT TTGCTGCGTG
  TGTGCATGAA AATACAGGTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52023975	NES15040323	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	G	T	T	T	G	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37666155					SNP	T	T	T	T	T	G	T	T	T	G	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52023975	NES15040323	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:59997376 () rs orientation: forward

Symbol	Name	Function Class
Rr196116	regulatory region 196116	1576 bp distal
Rr204367	regulatory region 204367	1619 bp distal
Rr209877	regulatory region 209877	within coordinates
Thsd4	thrombospondin, type I, domain containing 4	within coordinates