rs37671918 SNP Detail

Summary

• ID
  rs37671918
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:19917694 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGAAGTGTA AACTTAGCAC
  CACAGAAAGA TAAAAGGGAC CGATACACCT TCAATGGTTG TAGACACACA CCTGCCTTGA
  ATCATACCAA GATTCAGCTA CAGAAACTAA AATAATGGAA ATGTTATTGT CTAGCAACCT
  CATTATGGCC TACATTTGAG CATCGGTGAG ACTATTTTCA AATTGCTTTT GAAAAGATAA
  R
  CATCACCTGT ACCTGTGCTG ATACTCAATT GTCCAACAGT GCTTATCACT TTGAAGACGT
  AAAGGAACCG AATCTACTTG TAACAGACCC ATTTGCTTAA TCGTTTGAAT AAAACTTAAA
  CAAAAGACAA AATTTTGGCT CTTACTAAGA AATAGAAATT TTTTTTTATC AGCTCAACTC
  AGCTAGAGAA AGGAAAATAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss51072287	NES14365093	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	A	G	G		A	G	G	A		G
ss324279232	CHEV_13_19825393	CHEVERUD	SCREENING_POP	f	SNP								A					G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs37671918					SNP	G	G	G	G	A	G	G	A	A	G	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51072287	NES14365093	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:19917694 () rs orientation: forward

Symbol	Name	Function Class
Gpr141b	G protein-coupled receptor 141B	573 bp upstream
Tssr121608	transcription start site region 121608	769 bp upstream
Tssr121609	transcription start site region 121609	709 bp upstream
Tssr121610	transcription start site region 121610	570 bp upstream