rs37677827 SNP Detail

Summary

• ID
  rs37677827
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:123601406 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCTTTTAAG TATGAATTTT
  TTATACAAAG TAAAAAAATG ACTCATTTTA ATACTTTTAG AATAGTCTTA TATTTAAATT
  CTTGATATAT TTGTTTTCTT TTGTGTTGGG GAAAAGTTAG AAATAAATGA TTTTTGTATG
  TGTATTATGA ATTATCTGTT AAATAATGTA TCCTCCAATA CTTTATTGAA AGTTATCACA
  Y
  TAAATTTCTG TGTATGTTAT ATCTAATTAT GGAATTTTTG TTTTGCATAA ACATATTCTT
  CAAGGCATAA AAAGATAATG ACTAAGATCC CAGAGTGACT TTTTCTCTTT AGACACACTA
  ATTAGAACAG CTTTTACACT ACAAACTCCC TTCACAGCAG CTAAGGGAGT GAGGGGTGAG
  GTCTTGGCAC TTGGCTTTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss51028518	NES13904379	PERLEGEN	MM_PANEL2	f	SNP	C		C	T	C	C	C	T	T	T		C	T	T	C		C
ss135773725	ENSMUSSNP7153208	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C					T
ss320923139	CHEV_3_123510675	CHEVERUD	SCREENING_POP	f	SNP											T					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs37677827					SNP	C	C	C	T	C	C	C	T	T	T	T	C	T	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51028518	NES13904379	PERLEGEN	MM_PANEL	f	SNP	C/T