rs37685547 SNP Detail

Summary

• ID
  rs37685547
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:5819187 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGGCAGCA AGGGACAGAG
  CAGGATACCT GATTCCCTCC TCTGGCCTCT GCACATTTGC ACATAGGCAA GTCCACATCC
  TCACACATGC ATATATACCA CACACACACA CACACACAAT TATGTAAGGA TATAAATTAT
  ATGCAAATAC TATGCCATCT TACATTGAAG ATCAGAACAC CTGACAACTC TCAGGCATCC
  R
  AAAGCCAATT CCCCACTGTG CTGGTTAGTT CTACACCTAG GAAGATAGGG TCTCAACTGA
  GAAAATGTCT CTATCAGATT GCCTACAGCC AAATCTGTTG GGGACATTTT TATGATTAGT
  GATGGATGTG GGAGGATCCA GTCCACTGTG AGCAGTACCA CTCTTGGGCA GGTGGTCCTA
  AGTTATATAA AAAAGCAAAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss50577558	NES13649392	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37685547					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50577558	NES13649392	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:5819187 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10479	CpG island 10479	1343 bp proximal
Rr363624	regulatory region 363624	613 bp proximal
Scyl1	SCY1-like 1 (S. cerevisiae)	within coordinates