rs37686496 SNP Detail

Summary

• ID
  rs37686496
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:121069490 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCCAGTTTG ACACTCCCTG
  AGTTCTGTAT CTTATTGGTC GGTATTTGTG ATTTGTAGCT CAAAGCTTTG TGCATCACAG
  GTTATGCACA CAGCGTCCAC GAGAGGGCGA TATAGCCTCG CTTTTAAGTC CTACACCGTC
  AGCGCAAGCG CGGCAAGAGT TCGCGAGCTA GGGGAAATCA TTACCAACTT CCTTTCCACG
  K
  TGAAGTCAGT GACCCTTCTG TCACTTGGCA AAGCAAGCCA GGCAGCGAGC CTCGAAAGGC
  CGTCCTTTAA GTTAATGATT TATTGATTTT GCTGCCTGGT TTTGCTTTCA CTGAGCCGGA
  GAGAAGGGGG TTGTCTTTTT AAACGTTCGT AGCTTGTTTG CTAGAATTCT AAACAGAAAG
  CTAAGCCTTC CTAGTGTGTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss51569572	NES14614186	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G		T	G	G	T		G
ss324851448	CHEV_14_121231300	CHEVERUD	SCREENING_POP	f	SNP											G					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs37686496					SNP	G	G	G	G	G	G	G	G	G	G	G	T	G	G	T	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51569572	NES14614186	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:121069490 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6879	CpG island 6879	within coordinates
Rr287003	regulatory region 287003	90 bp distal
Rr390218	regulatory region 390218	within coordinates
Rr404289	regulatory region 404289	within coordinates