rs37695136 SNP Detail

Summary

• ID
  rs37695136
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:121260221 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATCATGTC CTGGGTCAGC
  AAGCCTGAGT TACAGGCAGT TAGAGCCTGC TTGCCAGCCC CCCAGCCCTG GGCAGTCACT
  GCTGTGAGAC AAGGGTCTCC CCCCCCCCCC CCAGAACAGG GTGTCATTCC CATACACCCT
  AGAACAGTTT AGTCAGGGTA AATGCGCCTT CCCAGGCCCA CTTTTGTCTG AACCGGTAAG
  R
  CCAGCCTGGA AAGGTGAGTT CCAGAGGCAG AGATGGGAAA GCCTTCTAAG AGCATAGATC
  TGAGCAGGGT TTTGAAGGAT GGCTGCTGAT GTGGAAGAGG GAAGAGAAAG AAAGTGGAGC
  CGGGTTTGAG GGCTTGCCAG CTGCTGTGGA GAGCCTGGCT CAGGTGGTCA GGATGGATGG
  AGTCTGGGCA GACCCTCTTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51983580	NES14997541	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37695136					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51983580	NES14997541	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:121260221 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21149	CpG island 21149	400 bp distal
Cpgi21150	CpG island 21150	1528 bp proximal
Gse1	genetic suppressor element 1, coiled-coil protein	Intron
Rr671560	regulatory region 671560	1446 bp proximal
Rr671561	regulatory region 671561	1885 bp proximal
Tssr83195	transcription start site region 83195	844 bp upstream