rs37707165 SNP Detail

Summary

• ID
  rs37707165
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:63285093 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGGTACAGT GGCCAGGGTC
  CTGCCGTCCT GAGTGTCTCG GTGGGCAAGG GGACGGTGGC CGGGCGCCGC GGGCTGGGTC
  GGGGCTGTTT CGGAGGTGCA CCGGTGGCGC CTGCCCTCCA ACCAGGCAGG GGGGCCCAGG
  GCCGCGGGGT CAAGGGGCGG GTCCCGGACC GCAGCCGGAA CCGGAGGGCG CGGCGCGTGC
  R
  GGATCGTCCG ACTGAGGCCC GCGTCCCGGC AGCGGAGGTG GCGGCGAGAG GAGGAGGAAG
  GCGGCCGTTA GACCGCTGTT ACTCCGGAAC CAAAACGCGA TGGCGCCGGA ACCCGGGGAG
  CCGACATGTG GGACCCGCCT CCTGGGGCGC CATGTTGGAA GAGGGCAGCT GGGGCGGAGC
  AGGGATCTCG TGCTAGGACT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss52026090	NES15043504	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A	A	A	G	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37707165					SNP	A	A	A	A	G	A	A	A	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52026090	NES15043504	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:63285093 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21914	CpG island 21914	within coordinates
Map2k5	mitogen-activated protein kinase kinase 5	within coordinates
Rr401444	regulatory region 401444	within coordinates
Rr680973	regulatory region 680973	81 bp proximal
Tssr90089	transcription start site region 90089	45 bp upstream
Tssr90090	transcription start site region 90090	3 bp downstream
Tssr90091	transcription start site region 90091	24 bp downstream
Tssr90092	transcription start site region 90092	149 bp downstream