rs37711204 SNP Detail

Summary

• ID
  rs37711204
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:42266024 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAGAGAACC CCAAGAGTTG
  ATCTTCAAGG GAAACATTTT CTGGCTTTGT TTGTTTGTGT TTGAGAATGG ATCTTAGTAA
  GCTGTTTCTC TAGCTGGCTT GGAACTCTCT ATGTAGACCA TGTTGGCTTC AGATTCACAG
  AGATCTGCCA GCCCCTACCT CCTGAGTGCT AGGACTAAAG GTGTACACCA CCATGCACAG
  M
  TAGGAGTATT TTCTATCTCT GGGTTACTGG TAGAGTTTGA AGAGAAATGA TTTCCACAGG
  AGCAAGATAG TTAGTATGTG CCTGCTCCTC ATATTGTGAA ATAAGATCTC TTCTACCCAG
  GCTGTCCCAG AATCATGGCC TGGGCTGACC CTGGCCCCGG AGGATGAGTT AGTATAGAGT
  GTGTTGGGCC ATCATGAAGT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51633906	NES14837976	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37711204					SNP	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51633906	NES14837976	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:42266024 () rs orientation: forward

Symbol	Name	Function Class
Clcn1	chloride channel, voltage-sensitive 1	within coordinates
Rr629312	regulatory region 629312	979 bp distal