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rs37711835 SNP Detail
Summary
  • ID
    rs37711835
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr15:51728714 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                          GGCGCCGAGG GGAGAGCGCG GTCAGCCCGC GCCTGGGGAA
    GGCGGCAGGA AGCGCGCCCG GCAGGGATCA GCCTCACACG TGGGCCTGTG GCCGCAACCC
    R
    CACTCACCAG GCCGTCGATC TGCACCTGCT TCACGGCCGA ATCTCCGGAG CCGCCTTTGC
    CTTTGCCCTT CCCCACCGCG CCGCCAGCAG AACCGGAGGA                      
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
A/J
AKR/J
DBA/2J
FVB/NJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
WSB/EiJ
ss51665647 NES14579643 PERLEGEN MM_PANEL2 f SNP A G G G G A G G G
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
A/J
AKR/J
DBA/2J
FVB/NJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
WSB/EiJ
rs37711835 SNP A G G G G A G G G
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss51665647 NES14579643 PERLEGEN MM_PANEL f SNP A/G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr15:51728714 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Cpgi7083 CpG island 7083 within coordinates
Eif3h eukaryotic translation initiation factor 3, subunit H within coordinates
Rr311732 regulatory region 311732 within coordinates
Rr404375 regulatory region 404375 127 bp upstream
Tssr134286 transcription start site region 134286 130 bp downstream
Tssr134287 transcription start site region 134287 180 bp downstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory