GGCGCCGAGG GGAGAGCGCG GTCAGCCCGC GCCTGGGGAA GGCGGCAGGA AGCGCGCCCG GCAGGGATCA GCCTCACACG TGGGCCTGTG GCCGCAACCC R CACTCACCAG GCCGTCGATC TGCACCTGCT TCACGGCCGA ATCTCCGGAG CCGCCTTTGC CTTTGCCCTT CCCCACCGCG CCGCCAGCAG AACCGGAGGA R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
DBA/2J |
FVB/NJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss51665647 | NES14579643 | PERLEGEN | MM_PANEL2 | f | SNP | A | G | G | G | G | A | G | G | G |
SNP Consensus Information | ||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
DBA/2J |
FVB/NJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
WSB/EiJ |
||||
rs37711835 | SNP | A | G | G | G | G | A | G | G | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss51665647 | NES14579643 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr15:51728714 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi7083 | CpG island 7083 | within coordinates | ||||||
Eif3h | eukaryotic translation initiation factor 3, subunit H | within coordinates | ||||||
Rr311732 | regulatory region 311732 | within coordinates | ||||||
Rr404375 | regulatory region 404375 | 127 bp upstream | ||||||
Tssr134286 | transcription start site region 134286 | 130 bp downstream | ||||||
Tssr134287 | transcription start site region 134287 | 180 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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