rs37712556 SNP Detail

Summary

• ID
  rs37712556
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:33962152 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTACTGCTC TTACCTTTAA
  AATACTTGGA ATTGTTAAAA GCACAACTTC TTACAGAGTT AATGATACAT GTGGATATAG
  TGACTAATAG AGAATAAGAA ATTAAATGGA CGCCCTCTGT GACTGGAAAG ATTCTATTTT
  GCAAAGCGCA ATAAAGTTAA GGATGCAGAT TTCATCCCAA GAAAGATCAA GAGAAGATAA
  Y
  GTGAAGCCGG TGGGTAAACG CAGATGGAGT TCTAATACAG CTAAACGACC AGAGGAGGTC
  AGGAAGGAGA GCACACTAAA TAAGAAGTCA GAGGGGAGAG CCGAGCATAG CACTGTGTGT
  ACACGGTCCA GTGCTTGGGC AGCTGAAGTG GGAGGATGTC TGGAATCATG AGCTAAAGAC
  CCTGCTGGAC AACAAAGTGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50942610	NES13471470	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37712556					SNP	T	T	T	T	T	T	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50942610	NES13471470	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:33962152 () rs orientation: forward

Symbol	Name	Function Class
Dst	dystonin	within coordinates
Gm37354	predicted gene, 37354	within coordinates
Tssr6161	transcription start site region 6161	595 bp downstream