rs37726391 SNP Detail

Summary

• ID
  rs37726391
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:133101997 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAAAGACAA ATGAACTATG
  CTGACCATCT CTCCTTCTCC ATTTATACAG TTCTGGACGC CAAACCAAGG GACAAAGACA
  CCCACAGTAA ATGGGTCTTC CCATCTCAAT GAATGTAATC AAGAGAGCCT TCTAGGGGCC
  CAGGTGGCTA GATCCTCATG TGATTCTAGA TTCTGTCAAG TGGCAATCAA CACTAACCAG
  K
  CACTATCAGC TACCAGGAGA GTGTAGTTTT GAAATCCCTG CTGTAGTTGT TTTGCGCATA
  AAAATTAACT TTTCTTCCAA CCTTGCACTT TCTTTAGAGC AAAGTGTGCT TCATATGCAA
  AAATCTTTGC TCCCAGGCAG TTCCTGGGGC TTTGCTCTTT CTCTCTCTTT TTTTTTTTTT
  TTTTTTTTTT TTTTTAGGTA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss51521478	NES14761377	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G	G	G	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs37726391					SNP	G	G	G	G	G	G	T	G	G	G	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51521478	NES14761377	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:133101997 () rs orientation: forward

Symbol	Name	Function Class
Tssr49076	transcription start site region 49076	150 bp upstream