rs37726980 SNP Detail

Summary

• ID
  rs37726980
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:56582398 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAATTTGTA AAAGTTCCAT
  GTAAATTATT CCCAGTAACT TTAAATTCTG TCCTATAAGT TAGTACTTAT TTTAACTTAA
  ATATTTATTC ATTGTATTTC AGATATAAAG ATATATAAAG TCTTAGAACA ATACATTTTT
  TTAAAAAAAC TATGAAATAA GCATAATGCT TTTATTTAGA TTAAAGATGT AATTCAAGTA
  Y
  AATGACCTGA TTAAGTTTAT TTTAATACTT TATTTTTCTG TGTAATGTGT GAGCAAAAAT
  TATCTTTGGA GAACAGCATT TCCACACAGT CTCTAGCCAA GCTTGTTAAT GTTCTTGAGG
  GATAGGGACT CTGAAATGAA CGCCAAAAAG GATTCAGATG TAAAACTGTA CTTGGACTTG
  TTTGAATAAT TTTGCATTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51962349	NES14978632	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37726980					SNP	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51962349	NES14978632	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:56582398 () rs orientation: forward

Symbol	Name	Function Class
9330109K16Rik	RIKEN cDNA 9330109K16 gene	278 bp upstream
Glra3	glycine receptor, alpha 3 subunit	within coordinates