rs37729525 SNP Detail

Summary

• ID
  rs37729525
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:67100752 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAAAAAAA AAGTGCTCTG
  GGCACTTAGG GCTACATTGG TCCTGAATAC CTGAATGTAG TCTCAGTTAG CTAGAATAAA
  GACTTTCATT TGACTACCAA CTGTCTGAGT GGTCTTCTCT GGTGGGCTCC TATAACAGCT
  GAACTATGAC AGCATTGCGA GAGCCTACAA AGTATTTAGA AAGTTAGGAA ATAGAACCCT
  R
  TGATAAAGCA ATTTTATATA TTTCTTAAAT GAATAACAGA AATGAATGAA AGATTTTAAT
  TTCTATTTAT TCTATTTCAT TTGTCCTTCA GGTGTCAAGA AATTTACCAA GGATGAAGTG
  AAAAGGGCAA GGAAGAGTTA ATTCAAGGCT GTTGCAATGG AAGAAAGAAA CTGAACACAA
  CTTCGTTAAA ACAAAGGATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50446902	NES13446958	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37729525					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50446902	NES13446958	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:67100752 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10165	CpG island 10165	1270 bp proximal
D18Mit209	DNA Segment, Chr 18, Massachusetts Institute of Technology 209	1790 bp distal
Gm50164	predicted gene, 50164	89 bp upstream
Rr355164	regulatory region 355164	1152 bp distal
Rr356406	regulatory region 356406	within coordinates
Rr393837	regulatory region 393837	1843 bp upstream