rs37730252 SNP Detail

Summary

• ID
  rs37730252
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:82983632 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGTCACAA CCAGGCGGCC
  CCATTTTCCA GCCCCTCATC TACGTTGGCC TATTTTTCAG CCTCAAATTT CTCTCCACAG
  TGGCTCTGCC CAGCCTCCCC TCCCTCCCCT TACTACAGCC TGTGATGCTC AGGGTTTGCC
  CTGTCACCCC TTTGGGGAAC TCACCACACT GATTCCGCTC AGTGCCCAGG TCTGTGGTTC
  R
  CCAGCTACAA CAATGATAGG GAATATCTCC CGCTGTTCCA GAGAGCCCAC CTGGTAAATT
  TAAAAGCTCA AGATTTCTGC TTTTAATTTA AAAGGTAGTG CTTGTATGTG TCCATTTTAG
  GAATGTTTGT GATTGGATTG CTAGGGTTAG CTTTAGGATG AGTTTTGGTC ATTGGAGAGT
  CCTGCAGTGT ATTCCAGGCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51727797	NES14564635	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37730252					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51727797	NES14564635	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:82983632 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7437	CpG island 7437	420 bp proximal
Rr310854	regulatory region 310854	1530 bp distal
Rr312184	regulatory region 312184	168 bp proximal
Rr404540	regulatory region 404540	588 bp upstream
Serhl	serine hydrolase-like	762 bp upstream
Tssr132408	transcription start site region 132408	770 bp upstream
Tssr132409	transcription start site region 132409	850 bp upstream
Tssr132410	transcription start site region 132410	875 bp upstream