rs37733094 SNP Detail

Summary

• ID
  rs37733094
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:122035541 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTTTTGTTT CCTCCCAAGG GCAGTTGAAG ACCTGGTTAT
  CAGGTGTGAC TTGGGAGAAG CTCCTGGCTC ATCTAGCTTT TCTTTTTCCC TTTAGTCTAT
  S
  TATGTGAGGA GAAGCCAAAG GCCTTGCTTG GCCGTTGCAA TTTTTCCTCT GTGTTGACCA
  ATGTCCTGGC AGACTGGATG CTGGGTAGAG CCCACTCAG                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss51021018	NES13905840	PERLEGEN	MM_PANEL2	f	SNP	C		G	G	G	G	G		G	G		G	G		G
ss135737697	ENSMUSSNP6093951	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	G					C
ss320909858	CHEV_3_121944810	CHEVERUD	SCREENING_POP	f	SNP											G			C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs37733094					SNP	C	C	G	G	G	G	G	C	G	G	G	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51021018	NES13905840	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:122035541 () rs orientation: forward

Symbol	Name	Function Class
Gm46822	predicted gene, 46822	within coordinates
Gm65290	predicted gene, 65290	1212 bp upstream
Rr375675	regulatory region 375675	868 bp upstream
Rr584261	regulatory region 584261	850 bp proximal
Rr584262	regulatory region 584262	1223 bp proximal
Rr584263	regulatory region 584263	1306 bp proximal
Rr584264	regulatory region 584264	1961 bp proximal
Tssr31477	transcription start site region 31477	1211 bp upstream