rs37734492 SNP Detail

Summary

• ID
  rs37734492
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:16728034 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCGCAAGG TCAGTTTGGA
  GCGGGTGGCA GACTGCCTGG GGGCGGGAGA CCCTCCTCGG GGCTGGGCGG AGGCCTTTAA
  GCACCTCGCC ATATTGAAAG GCCACGCTGA GCCGTCTTTG TCTGCAGAGT CCTCCCAAGA
  ACTTTCAGCT ATATCCTGGT GTCTGGGGCA AGGGAGAAGC GATCGGAGCT CGTGGGACCC
  Y
  AACTTGGAGC CGGGACACTG GCGATTCCAG TTTGGACTGA ACTTTGAGCC TCGGGAATGA
  GCGTGCTTCA GTTCATGTAA GCATCCTGGA AAACTGCTTG CTACAACTCC GAGGGGGTTG
  GGGAAGCCAA CTTGGACTTG TTTCCTGAAG AGAAAATTGT AGGGAGGAGA CACTCTGTGC
  GAGCAGAGTT GCTAGGACTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51882081	NES14903380	PERLEGEN	MM_PANEL2	f	SNP	T	C	C	C	T	T	T	C	C	C	T	C	T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37734492					SNP	T	C	C	C	T	T	T	C	C	C	T	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51882081	NES14903380	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:16728034 () rs orientation: forward

Symbol	Name	Function Class
Ccdc8	coiled-coil domain containing 8	mRNA-UTR
Cpgi18410	CpG island 18410	within coordinates
Rr642838	regulatory region 642838	1391 bp distal
Tssr64672	transcription start site region 64672	297 bp downstream
Tssr64673	transcription start site region 64673	183 bp downstream
Tssr64674	transcription start site region 64674	70 bp downstream