rs37734924 SNP Detail

Summary

• ID
  rs37734924
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:127723054 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTTTATTA GGGTAAAAAA
  AAAAATCTCT TTGTCATGCG AGAGTGTGGG ACTTGTGGGC TCTAAACAAG AGCTTGATAC
  ACACCAGGCG GTGGGCTGAG TGTGATGCTT ACACCCCCAG GGCATCCCCA ACCTGAGCAT
  CAAAGACCGT GAGGAACTAT GGCTCTTGGC CAAGTACAGT GGATGCCTTA GGTGCTTCCA
  W
  GGGGCAGGCC TCCAGAGCAG GACAAGTCTA AGTGAACTTA GGCCTCAGCT ACCTGACAGG
  CACAGAGCGT GGTTTTCCAG TGAGTGACCA CCTTACTCCA GAAAGGAGAA GGTAAAGAGA
  GCCTTCCAAA CCAAAAAGAA AAGACTGTTC ATGAGGGGTT CTCAAAGGTT GCAATTATAA
  TAAAACACTT CGCTGAAGGG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J
ss50946003	NES14148139	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A		T	A	A
ss323530328	CHEV_10_127324241	CHEVERUD	SCREENING_POP	f	SNP						A				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J
rs37734924					SNP	A	A	A	A	A	A	T	A	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50946003	NES14148139	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:127723054 () rs orientation: forward

Symbol	Name	Function Class
Rdh7	retinol dehydrogenase 7	within coordinates
Rr226506	regulatory region 226506	within coordinates
Rr226507	regulatory region 226507	1338 bp proximal
Tssr99825	transcription start site region 99825	1951 bp upstream
Tssr99826	transcription start site region 99826	1459 bp downstream
Tssr99827	transcription start site region 99827	1503 bp downstream