rs37741323 SNP Detail

Summary

• ID
  rs37741323
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:70927933 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTAAAACAT AGATTAGTGC
  ATTGGTACAA AGTACTTTGT CAGTTTTTGC ACACCTGTCT TGTAGCCTGG CTCCTGCATC
  TTCCCATGCG CATCTGTGGA GTTATGCAGG CACATAGCTA TTGCTTATGG CTTTTCACCC
  AAGTTATCTG AAAACAATAT CTTGATTGAT TCTGATACCT TTCTCACACA TCCCCAGCTC
  R
  CAAACAGTTG CTTAATCATC TTTGTGTATA GTAGTGTCCC CCATTACTTA TACAATAGAT
  TATGCTCCCA AACTCAACAG TGTCTGAATC ACTAGGTGGG GCTGAGAGGC TCAAAAGTGC
  ACAAGCCATA GGGAGTTAGC TCAGTGGTAA ACCTGCACTG GTCCAGTTCT GGGTTCTAAC
  TTCAATCCAT AGTTCTAGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51673416	NES14828340	PERLEGEN	MM_PANEL2	f	SNP	G	G	A	G	G	G	G	G	G	A	G	A	G
ss133273535	ENSMUSSNP1451314	ENSEMBL	ENSEMBL_Sanger	f	SNP		G						G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37741323					SNP	G	G	A	G	G	G	G	G	G	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51673416	NES14828340	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:70927933 () rs orientation: forward

Symbol	Name	Function Class
Gm66475	predicted gene, 66475	426 bp upstream
Gm66915	predicted gene, 66915	within coordinates
Tssr61339	transcription start site region 61339	345 bp downstream