rs37763831 SNP Detail

Summary

• ID
  rs37763831
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:10610380 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGATAATAGA ATGGGCCCAA ACAAGATGAG ATACAGGTCC
  AAATGTAAGT CTCGGTTCAG CCACGTGGGT TAAGGTAGAA AGATGGCTGG CCAGTTGTTA
  K
  GCCAACAGCT AGTTGTTATG GCAGAATAAC CTCCATAAAA GCAAGCAAGC AAGGAAGGAA
  TGGTTTATCT GGCTCACAGG TGCAGCCATC TTGGCAGGGG                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50601066	NES13642680	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	G	T	T	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37763831					SNP	T	T	T	T	T	T	T	T	T	T	G	T	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50601066	NES13642680	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:10610380 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10616	CpG island 10616	1156 bp proximal
Cpgi10617	CpG island 10617	1961 bp proximal
Rr362969	regulatory region 362969	820 bp proximal
Tssr155079	transcription start site region 155079	1207 bp upstream
Tssr155080	transcription start site region 155080	1284 bp upstream
Tssr155081	transcription start site region 155081	1297 bp upstream
Vwce	von Willebrand factor C and EGF domains	1202 bp upstream