rs37763883 SNP Detail

Summary

• ID
  rs37763883
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:33899167 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACTCACTT TAGAGATGGA
  AATTTAAAAA TTAAGGCTTT ATTTTCTGAG TGCTCAGGGA GGCAGCCAGT TTGGGATCTG
  AACCACGTAC GGGGTGGGAG ATTATACAGC ATTGTTATAG GATGGTAACA CAATTCAAAG
  TGGGGAGCTG GTGGGAACTG CAGCGTTATC CAATTGTATT TTGACATTAT GTGTTAAACA
  W
  GGGAGTACCT GTTGGGAGAC TGAGCCTGTA CAGAGCACCT GGCTTCAAGG TCCTTAATTC
  ATTCTCCAAG ACATTAGGTC CAGAGCTAAG AGTGATAAGG GGACAAAGAC GCTGGCAGGA
  GCATATGAAC TTGTTTAACC CTGCCAGCAA GACAGAGAAG TTGTGCCTGA GATGTCTAGA
  CTCAACCGTT TACAACAGAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51450272	NES14437846	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	A	T	T	T	A	T	T	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37763883					SNP	T	T	T	T	T	T	A	T	T	T	A	T	T	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51450272	NES14437846	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:33899167 () rs orientation: forward

Symbol	Name	Function Class
Ccdc39	coiled-coil domain containing 39	708 bp upstream
Rr575077	regulatory region 575077	338 bp distal
Tssr32964	transcription start site region 32964	770 bp upstream
Tssr32965	transcription start site region 32965	705 bp upstream