rs37775925 SNP Detail

Summary

• ID
  rs37775925
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:32666075 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCGCCGCTG TATTCCATTG
  GCCATTGGTG GGCCGGAAAG AGGAGGTCAG GACCTGCGGG GTGGGCGGGG CAATAGCTCC
  TGAGCAGACT TTCAGAAGGG AGAGGTCTTC TCAGAAGCCT GTTGGACCTG GCTTGCAGAG
  GAAAAAAAAA CTTAAGTGTC CGTTTTTTTT TTTTTTTTTT TTAAATCAAA GAAAAAAAAA
  W
  TCATCTTGAG TTGTGGATCT ACTAGTGGGA GGAATGATCA CATTGAGATG AAAGAGATTG
  ATGAAAGCCA GTCAGTTTTG TGGGTGGGCT GAAAACAGTT TCTTCAGGGG ATTACTAAAC
  TCAAGAATTA TTAACCTTTC TACTTTTTGA AACAATGATG GACTTTGATT GAAGGGGTCC
  AAAACTGTTT TTATGTTGAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	NOD/ShiLtJ
ss50669012	NES14018893	PERLEGEN	MM_PANEL2	f	SNP	T	A	T	A	A
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	NOD/ShiLtJ
rs37775925					SNP	T	A	T	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50669012	NES14018893	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:32666075 () rs orientation: forward

Symbol	Name	Function Class
Ets1	E26 avian leukemia oncogene 1, 5' domain	within coordinates
Rr676252	regulatory region 676252	1289 bp proximal
Tssr84300	transcription start site region 84300	1919 bp downstream
Tssr84301	transcription start site region 84301	318 bp downstream
Tssr84302	transcription start site region 84302	129 bp downstream
Tssr84303	transcription start site region 84303	13 bp downstream