rs37795073 SNP Detail

Summary

• ID
  rs37795073
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:38355049 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTGGATAC TGCAATGGTT
  TTGGGCAACG TTATCACAGC TCCTTAGAGA CTACAGTTTT CTCCCAACCA TAATAAAGCT
  GCAAGCCCTA ACTTTGTCTT TCACCCCAGT AAAAGCTTTC CTGTGCTGAT GTTGTCACGT
  TTTATAACAC CAGGTGGGCT CCTTAGAGCT GTTGTTGTTT AAAATAACTT CTCCAGTACA
  Y
  TTAGGGCCAT CTTCTGTCCA TTATAATTAC AACATGTCTC AAACAGCCTC TGCAAGGATG
  CAGAGACTTA AAGGAATACC ACAACCTTTA GGAAATCAGG GATCATTTCA GCTGATTTAG
  TAAATTCAAC AGGGTGGCAT AGAGTGCTAT CAGTAACACG GACTTTAGAC CATAGTAAGG
  GAAGCCTCTG CTTTGGGTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51288119	NES13774249	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	C	C		T	T	C	T
ss133127205	ENSMUSSNP1768180	ENSEMBL	ENSEMBL_Sanger	f	SNP								T				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37795073					SNP	T	T	T	T	T	T	C	T	T	C	C	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51288119	NES13774249	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:38355049 () rs orientation: forward

Symbol	Name	Function Class
D0Nds34	DNA segment, Nuffield Department of Surgery 34	839 bp distal
Rpl30-ps1	ribosomal protein L30, pseudogene 1	960 bp downstream
Rr135132	regulatory region 135132	952 bp proximal
Rr146156	regulatory region 146156	1048 bp distal
Tssr55644	transcription start site region 55644	1376 bp downstream