rs37798615 SNP Detail

Summary

• ID
  rs37798615
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:33696412 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACCTGGGAA CCACAGCTTC
  TAAACTTTTT AGAACTTACC TCAGCCTCTG GATCATTCAG GAAAGTCTAT GTACTGACTT
  GTAGATTCAG GTCAGAGACT CATCCCCATA GTTTGCCCTG GAGACATTAG TATATTTAGG
  GGGAACTAGG AAAAGCAGCC ACTTAGTGAT AGGGGAATGT TAGAACTAAT AGTCACTAGC
  M
  GTGCTTGACA GCCAGCTGTA TTTTCATCTC TGTTGATCAA AGTATCGCCT AATATCTTAG
  CATTTAGAGT TAATATGCTT TCTAAAATCC CACTTTCTTC ATATTTGAAA TAAGTCTTTG
  TTCCTTTAGT TGCTTTCTAA GAACCTTTTA ATTACAATTT GATCATATAA TTTGTCAGAA
  TTGCCACACC AATAAAATTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51595716	NES14852332	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37798615					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51595716	NES14852332	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:33696412 () rs orientation: forward

Symbol	Name	Function Class
Exoc4	exocyst complex component 4	within coordinates
Rr379165	regulatory region 379165	735 bp upstream