rs37798762 SNP Detail

Summary

• ID
  rs37798762
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:65443121 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTAATTGGC ATCTATCTGT
  ACTAATCTAG AGAAGTTAGT GGGTCTGTGT GGAGCCATCA TGGGAATCAA TAGCAGTCAT
  TCATTTACTT TTCTGGCTTT TCATCAATAA GTAGGTTACT TCTGAAGCAG CTGTCACCTG
  GCTTCAGGTT GAGGTCAGGC TTTTCCTGAT GTAATAAAAA TGAATCTTGG AAAAAGCAAC
  R
  ATTTCTAATT ATTCAGAAGG TTGGGGGATA AAAGGCTATC TGGCAATTCC TGACTATAAT
  TGCATGATAC ATAATATATT TTATTATCCA GTTGAATCCA AAGCTTTTAG TTATTATTGT
  ACATGAAAAA GATACTAGTG ATATGAAGGT GTAAAGAAAA ACTCAGGAAT ACAAGATACT
  TTTGATTAAT TCTTCTGTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50966534	NES13931806	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	G	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37798762					SNP	A	A	A	A	A	G	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50966534	NES13931806	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:65443121 () rs orientation: forward

Symbol	Name	Function Class
Rr577699	regulatory region 577699	1773 bp distal
Rr577700	regulatory region 577700	1685 bp proximal
Tiparp	TCDD-inducible poly(ADP-ribose) polymerase	Intron