rs37801083 SNP Detail

Summary

• ID
  rs37801083
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:75236018 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCGTG GAGCTCTCAG CATCCACAAC
  R
  AGGAAGGGGC AACGCCTGTG AGCCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss50415663	NES13934679	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	G	G		A	G		G
ss322267507	CHEV_7_82731156	CHEVERUD	SCREENING_POP	f	SNP											A			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs37801083					SNP	A	A	A	A	A	A	G	A	G	G	A	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50415663	NES13934679	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:75236018 () rs orientation: forward

Symbol	Name	Function Class
Akap13	A kinase anchor protein 13	within coordinates
Rr400375	regulatory region 400375	1707 bp upstream
Rr649259	regulatory region 649259	555 bp distal
Rr649260	regulatory region 649260	855 bp proximal
Tssr67241	transcription start site region 67241	556 bp downstream
Tssr67242	transcription start site region 67242	82 bp downstream
Tssr67243	transcription start site region 67243	50 bp downstream
Tssr67244	transcription start site region 67244	35 bp downstream
Tssr67245	transcription start site region 67245	within coordinates
Tssr67246	transcription start site region 67246	9 bp upstream
Tssr67247	transcription start site region 67247	37 bp upstream
Tssr67248	transcription start site region 67248	93 bp upstream
Tssr67249	transcription start site region 67249	116 bp upstream
Tssr67250	transcription start site region 67250	149 bp upstream
Tssr73048	transcription start site region 73048	1618 bp downstream