rs37807617 SNP Detail

Summary

• ID
  rs37807617
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143352762 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAAGTCATA TCCTATGCAG
  CTTGGAGAAG TTAGAAAAGG TTTGGGGTAC TTGCTTGTTG AATAATTGAC ACCACATAGT
  CCAGGTAGCA AGGAAACACA GAAAACACAA GCAGCCCATG GAGTGAGTAC CAGGCTGGAC
  CTGTTTGGGG CGCTTACACT GTGTAAAGAA TGAAAAGAAA ACACAAAGAA CAAACTCACT
  Y
  ACCTCGGCCC CTGTGGTCTC ACACAGCCCT TGGGGACTGG AAACTTCTGA TGCGAGACAG
  AAGGCAGAGC CAGTAGCCGC ACTTCCTCCT CCTTCTGAAG ACCTGTCAAA AGAGCTGGCA
  CCGAGGTCTC CCTCAACGTT AGTGCAGAAC CACCTTAAAC AAACTCAGAC GAGAATCAAG
  GAACTCAGCA AATACCTCAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51663308	NES14647428	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	T	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37807617					SNP	C	C	C	C	C	C	C	C	C	C	T	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51663308	NES14647428	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143352762 () rs orientation: forward

Symbol	Name	Function Class
D3Mit17	DNA segment, Chr 3, Massachusetts Institute of Technology 17	224 bp proximal
Gm33809	predicted gene, 33809	within coordinates
Gm38006	predicted gene, 38006	within coordinates
Rr398093	regulatory region 398093	within coordinates