rs37808482 SNP Detail

Summary

• ID
  rs37808482
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:82982866 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGAGATCAA CCCCCACCCC
  AGCCCGCAGT GAGAGGCACC CAGATTTTCA CACGAGTAAA ATAAGAGGTG GGGAAGGGGC
  TGGTGGCAGC TTGTGGTCGC AGGATAAGCA GGGCAGAATG GAGTCACAGG GACGGAAAGG
  GAAGAGGTAG ATGGAAATGA TGGGACACAG ATGGATGTGA ACATGAGGAT GAGACTGAAT
  R
  GAGGGACAGT GACTGTAGCC ATGGACCAGC AGGACAGACA GGAGCCGGCT GAGGTCATGG
  CTGCTGGAGG GGCTGGTTGA AGCAAGGGAA TTTTGAGGTC AAAGGAATGC GAGATGCCAA
  GTGCAAGTAT TGGTAACAAT GTGTCACTGG GAAAGATTGG GAAAGGTCCC AGGCTTCCTG
  GTAGGTGTCT TGTTCCCAGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51727803	NES14564654	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37808482					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51727803	NES14564654	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:82982866 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7437	CpG island 7437	1186 bp proximal
Rr304679	regulatory region 304679	1666 bp distal
Rr310854	regulatory region 310854	764 bp distal
Rr312184	regulatory region 312184	934 bp proximal
Rr404540	regulatory region 404540	1354 bp upstream
Serhl	serine hydrolase-like	1528 bp upstream
Tssr132408	transcription start site region 132408	1536 bp upstream
Tssr132409	transcription start site region 132409	1616 bp upstream
Tssr132410	transcription start site region 132410	1641 bp upstream