rs37809326 SNP Detail

Summary

• ID
  rs37809326
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr19:42113083 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTAACTAGG ATTGCCTTTG
  AATTTTACTA CTGGTAAGTT TTTATTTCTT TCCAAACAGT TCTCCCTTCT AGCTGGCCAA
  GAGTCACAGA AACACCGTAG CACTGCTTTG ACTGGCCTTT CTTTCCTATG GATATTACAG
  AGTCACATGA CTCTAACAAT AACAATAGTC TTTGAGGTAC CAGCACCAAA GCACTAGAAA
  Y
  AGGAAGAATG AGGGCAAGTC ACCGGCTCTA GGCCACACAG CCAGAGCAGT GGGACAGGCA
  TCCTTTCTCC CCCACCCTCG GCCCTCCAGT CCTGGGCACC TACCTAAGCC GGCTGCAGTG
  GTTCTGTTTG GGCGGCCTTT TCCTGCGCAG CCTCCTCAGC GCCTCAGCTA CACGGTGATC
  CCCTGCACAC TCCCAGATTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss50819821	NES13535527	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	T	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs37809326					SNP	C	C	C	C	C	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50819821	NES13535527	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:42113083 () rs orientation: forward

Symbol	Name	Function Class
Avpi1	arginine vasopressin-induced 1	Intron